Navigation Links
Allele frequency

Allele frequency is a term of population genetics that is used in characterizing the genetic diversity of a species population, or equivalently the richness of its gene pool. Allele frequency is defined as follows:

Given a) a particular chromosome locus, b) a gene occupying that locus, c) a population of individuals carrying n loci in each of their somatic cells (e.g. two loci in the cells of diploid species, which contain two sets of chromosomes) and finally d) a variant or allele of the gene, then the allele frequency of that allele is the fraction or percentage of loci that the allele occupies within the population.

To take an example, if the frequency of an allele is 20% in a given population, then among population members, one in five chromosomes will carry that allele. Four out of five will be occupied by other variants the gene, of which there may be one or many.

Note that for diploid genes, however, the proportion of individuals that carry this allele may be up to two in five. If the allele distributes randomly, then the binomial theorem will apply: 32% of the population will be heterozygous for the allele (i.e. carry one copy of that allele and one copy of another in each somatic cell) and 4% will be homozygous (carrying two copies of the allele). So all together 36% of diploid individuals would be expected to carry an allele that has a frequency of 20%. However, alleles distribute randomly only in the absence of selection and under other assumptions. When these conditions apply, a population is said to be in Hardy-Weinberg equilibrium.

The frequencies of all the alleles of a given gene often are graphed together as an allele frequency distribution histogram. Population genetics studies the different "forces" that might lead to changes in the distribution and frequencies of alleles -- in other words, to evolution. Besides selection, these forces include genetic drift, mutation and migration.

Compare genotype frequency.


If there are ten individuals in a population and at a given locus there are two possible alleles, A and a, then if the genotypes of the individuals are:

AA, Aa, AA, aa, Aa, AA, AA, Aa, Aa, and AA

then the allele frequencies of allele A and allele a are:

pA = (2+1+2+0+1+2+2+1+1+2)/20 = 0.7
pa = (0+1+0+2+1+0+0+1+1+0)/20 = 0.3


(Date:11/16/2015)... , Nov 16, 2015  Synaptics Inc. (NASDAQ: ... interface solutions, today announced expansion of its TDDI ... touch controller and display driver integration (TDDI) ... smartphones. These new TDDI products add to the ... resolution), TD4302 (WQHD resolution), and TD4322 (FHD resolution) ...
(Date:11/12/2015)... 2015   Growing need for low-cost, easy ... been paving the way for use of biochemical ... analytes in clinical, agricultural, environmental, food and defense ... in medical applications, however, their adoption is increasing ... continuous emphasis on improving product quality and growing ...
(Date:11/10/2015)... 10, 2015 About signature ... helps to identify and verify the identity of ... as the secure and accurate method of authentication ... particular individual because each individual,s signature is highly ... when dynamic signature of an individual is compared ...
Breaking Biology News(10 mins):
Other biology definition